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main:samplepackunpack [2017/08/25 19:06]
bshirley |
main:samplepackunpack [2017/08/25 19:56]
yli [Sample components] |
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| ===== Sample components ===== | ===== Sample components ===== |
| * **Saved sample file**\\ This file is created when a sample is processed and has extension ".adcisample". By default it is found in the ADCI data directory specified during [[main:installation | installation]]. It contains - among other things - the status (other object, monocentric chromosome, dicentric chromosome) of all objects found within each image in the sample. This file is required when including the sample in [[main:calibrationcurve | calibration curve]] generation or [[main:estimatedose | dose estimation]]. This is the only sample component necessary to use ADCI if viewing images in the [[main:metaphaseimgviewer | metaphase image viewer]] is not required. | * **Saved sample file**\\ This file is created when a processed sample is saved and has extension ".adcisample". By default it is found in the ADCI data directory specified during [[main:installation | installation]]. It contains - among other things - the status (other object, monocentric chromosome, dicentric chromosome) of all objects found within each image in the sample. This file is required when including the sample in [[main:calibrationcurve | calibration curve]] generation or [[main:estimatedose | dose estimation]]. This is the only sample component necessary to use ADCI if viewing images in the [[main:metaphaseimgviewer | metaphase image viewer]] is not required. |
| * **Contour files**\\ A component of a [[main:processedsample | processed sample]] which are necessary to draw the colored outlines around chromosomes seen in the [[main:metaphaseimgviewer | metaphase image viewer]]. If contour files are not present, images will not appear in the metaphase image viewer. | * **Contour files**\\ A component of a [[main:processedsample | processed sample]] which are necessary to draw the colored outlines around chromosomes seen in the [[main:metaphaseimgviewer | metaphase image viewer]]. If contour files are not present, images will not appear in the metaphase image viewer. |
| * **Image files**\\ Images which were examined during sample processing. If image files are not present, images will not appear in the [[main:metaphaseimgviewer | metaphase image viewer]]. | * **Image files**\\ Images which were examined during sample processing. If image files are not present, images will not appear in the [[main:metaphaseimgviewer | metaphase image viewer]]. |
