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main:samplepackunpack [2017/08/25 16:04] bshirley |
main:samplepackunpack [2017/08/25 19:57] (current) yli [Pack (export) sample] |
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In the event a [[main: | In the event a [[main: | ||
+ | |||
+ | ===== Sample components ===== | ||
+ | * **Saved sample file**\\ This file is created when a processed sample is saved and has extension " | ||
+ | * **Contour files**\\ A component of a [[main: | ||
+ | * **Image files**\\ Images which were examined during sample processing. If image files are not present, images will not appear in the [[main: | ||
===== Pack (export) sample ===== | ===== Pack (export) sample ===== | ||
- | |||
<WRAP group> | <WRAP group> | ||
<WRAP column half> | <WRAP column half> | ||
+ | |||
+ | * **Sample ID**\\ Cannot be modified. ID of sample to be packed. | ||
+ | * **Description**\\ Description of the sample as specified when the sample was created. The description can be modified at this time if desired. When the sample is packed, the description saved within the packed sample will consist of the content found in the description text box here. | ||
+ | * **Contour files status / Metaphase images status**\\ If ADCI cannot locate either of these sample components, the status of the missing component is " | ||
+ | * **Pack Sample As Folder**\\ Click " | ||
+ | * **Pack Contour Files**\\ Specify whether to include contour files in the packed directory. Consult the " | ||
+ | * **Pack Metaphase Image Files**\\ Specify whether to include metaphase image files in the packed directory. Consult the " | ||
+ | * **Progress**\\ When the "Start packing" | ||
</ | </ | ||
<WRAP column half> | <WRAP column half> | ||
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</ | </ | ||
</ | </ | ||
+ | |||
+ | ===== Move packed sample to destination ===== | ||
+ | The packed sample directory must be moved to the destination computer. This can be accomplished simply by moving the directory using a USB stick or other transfer device. It may be desirable to compress (ie: zip) the packed sample before moving it. Note if a packed sample is compressed, ADCI cannot automatically uncompress it after it is moved to the destination computer, it must be uncompressed first before unpacking. | ||
===== Unpack (import) sample ===== | ===== Unpack (import) sample ===== | ||
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<WRAP group> | <WRAP group> | ||
<WRAP column half> | <WRAP column half> | ||
+ | * **Sample ID**\\ Cannot be modified. ID of sample to be unpacked. | ||
+ | * **Description**\\ Description of the sample as specified when the sample was packed. The description can be modified at this time if desired. When the sample is unpacked, the description of the sample will consist of the content found in the description text box here. | ||
+ | * **Contour files status / Metaphase images status**\\ If either of these sample components are not present in the packed sample, the status of the missing component is " | ||
+ | * **Unpack Sample and Save As File**\\ Click " | ||
+ | * **Unpack Contour Files and Copy to ADCI Data Folder**\\ Specify whether to unpack the contour files component of the packed sample and copy them to the ADCI Data folder specified when ADCI was [[main: | ||
+ | * **Metaphase Image Files Dropdown** | ||
+ | * **Unpack metaphase images and copy to specified folder**\\ Default selection. This option is disabled if metaphase images are not present in the packed sample. Click " | ||
+ | * **Use existing metaphase images in specified folder**\\ If metaphase images corresponding to the packed sample already exist on the destination computer, it is not necessary to copy the metaphase images within the packed sample to a destination folder. Use this option to specify the directory containing the preexisting metaphase images. | ||
+ | * **Skip locating or unpacking metaphase images**\\ This option will ignore the metaphase images which may be part of the packed sample. Note if the option is selected, it will not be possible to view images in the [[main: | ||
+ | * **Progress**\\ When the "Start Unpacking" | ||
</ | </ | ||
<WRAP column half> | <WRAP column half> |