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main:start [2020/09/15 18:10]
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main:start [2021/11/02 19:49]
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| If this is your first time using the software, the [[main:dongle | dongle]] and [[main:securitysplashscreen | splash screen]] pages will help get the software up and running. Next you may wish to consult the [[main:quickstart | quick start]] guide for a basic overview of the software and an example if its basic usage. The [[main:mainGUI | main GUI]] page provides and overview of the graphical user interface and can help you to locate the tools necessary to use the software. | If this is your first time using the software, the [[main:dongle | dongle]] and [[main:securitysplashscreen | splash screen]] pages will help get the software up and running. Next you may wish to consult the [[main:quickstart | quick start]] guide for a basic overview of the software and an example if its basic usage. The [[main:mainGUI | main GUI]] page provides and overview of the graphical user interface and can help you to locate the tools necessary to use the software. |
| |
| ===== Getting started ===== | ===== Peer-reviewed publications ===== |
| | [[public:references | ADCI patents and full publication list]]\\ |
| [[https://www.jove.com/video/56245/expedited-radiation-biodosimetry-automated-dicentric-chromosome | Video overview of ADCI published in the Journal of Visualized Experiments]]\\ | [[https://www.jove.com/video/56245/expedited-radiation-biodosimetry-automated-dicentric-chromosome | Video overview of ADCI published in the Journal of Visualized Experiments]]\\ |
| | |
| | ===== ADCI Online ===== |
| | [[adcionline:overview | overview ]]\\ |
| | [[adcionline:imgupload | upload metaphase images to cloud storage]]\\ |
| | [[adcionline:accesssystem | access ADCI_Online and begin streaming session]]\\ |
| | [[adcionline:interacting | interact with ADCI_Online (recommendations and additional explanation)]] |
| | |
| | ===== ADCI ===== |
| | ==== Getting started ==== |
| [[main:demoversion | demonstration version]]\\ | [[main:demoversion | demonstration version]]\\ |
| [[main:installation | installation]]\\ | [[main:installation | installation]]\\ |
| [[main:plots | plots]] | [[main:plots | plots]] |
| |
| ===== Samples ===== | ==== Samples ==== |
| [[main:sample | sample]]\\ | [[main:sample | sample]]\\ |
| [[main:processedsample | processed sample]]\\ | [[main:processedsample | processed sample]]\\ |
| [[main:combinesamples | combine processed samples]] | [[main:combinesamples | combine processed samples]] |
| |
| ===== Estimate dose ===== | ==== Estimate dose ==== |
| [[main:curvecalibrationwizard | curve calibration wizard]]\\ | [[main:curvecalibrationwizard | curve calibration wizard]]\\ |
| [[main:doseestimationwizard | dose estimation wizard]]\\ | [[main:doseestimationwizard | dose estimation wizard]]\\ |
| [[http://adciwiki.cytognomix.com/files/resources/guide_to_manually_derived_calibration_curves.pdf | guide to create manually derived calibration curves (pdf)]] | [[http://adciwiki.cytognomix.com/files/resources/guide_to_manually_derived_calibration_curves.pdf | guide to create manually derived calibration curves (pdf)]] |
| |
| ===== Reports ===== | ==== Reports ==== |
| [[main:report | report]]\\ | [[main:report | report]]\\ |
| [[main:samplereport | sample report]]\\ | [[main:samplereport | sample report]]\\ |
| [[main:optimalselectionsearchreport | optimal image selection model search report]] | [[main:optimalselectionsearchreport | optimal image selection model search report]] |
| |
| ===== Execution history ===== | ==== Execution history ==== |
| [[main:logfile | log file]]\\ | [[main:logfile | log file]]\\ |
| [[main:adcilogviewer | ADCI log file viewer]]\\ | [[main:adcilogviewer | ADCI log file viewer]]\\ |
| [[main:settingsandprefs | settings and preferences]]\\ | [[main:settingsandprefs | settings and preferences]]\\ |
| [[main:faqandtips | FAQ, useful tips and tricks]]\\ | [[main:faqandtips | FAQ, useful tips and tricks]]\\ |
| [[main:references | ADCI and underlying algorithm references]]\\ | [[bgq:startpage | View ADCI-BGQ wiki pages (in progress)]]\\ |
| [[main:abbreviations | abbreviations]]\\ | [[main:abbreviations | abbreviations]]\\ |
| [[main:acknowledgements | acknowledgements]]\\ | [[main:acknowledgements | acknowledgements]]\\ |
| [[main:contactus | contact us]] | [[public:contactus | contact us]]\\ |
| |
| ===== ADCI-BGQ (in progress) ===== | |
| [[main:bgqgetstarted | Get started]]\\ | |
| [[main:bgqworkflow | Overall workflow]]\\ | |
| [[main:bgqmaingui | Main GUI]]\\ | |
| [[main:bgqcreateasampleforaperson | Create a sample for a person]]\\ | |
| [[main:bgqcreateasampleset | Create a sample set]]\\ | |
| [[main:bgqcreateascenario | Create a scenario]]\\ | |
| [[main:bgqeditdescriptions | Edit descriptions of a scenario, sample sets and samples]]\\ | |
| [[main:bgqprocessasampleset | Process a sample set]]\\ | |
| [[main:bgqdisplaysamplelocationsanddosesofasampleset | Display sample locations and doses of a scenario on a map]]\\ | |
| [[main:bgqperformkrigingonasampleset | Perform Kriging on a scenario]]\\ | |
| [[main:bgqcomparekriging | Compare a Kriging result with a previous one]]\\ | |
| [[main:bgqdensifyakrigingresultofasampleset | Densify a Kriging result]]\\ | |
