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main:bgqcreateasampleset [2019/01/09 19:56] rlu45 |
main:bgqcreateasampleset [2021/11/02 14:58] bshirley created |
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- | ====== Create a sample set ====== | + | ~~BOOK~~ |
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- | A sample set is a set of samples, physically corresponding to one directory on the BGQ server. Typically, it contains samples of a set of persons within a geographical area (e.g. a city) where the nuclear event occurred, which were collected by responders in one iteration (see the overall workflow). It is the basic unit for submitting a job to the BGQ supercomputer to process samples. | + | |
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- | After creating one or more samples, you can start creating a sample set by clicking the ‘New sample set’ menu item within the ‘Sample sets’ menu. The right panel is similar to that for creating a sample for a person. | + | |
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- | {{ file: | + | |
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- | If the samples are located within multiple directories, | + | |
- | < | + | |
- | <WRAP half column> | + | |
- | Then click the ‘Move’ button in the middle. If the moving process takes some time, a progress dialog will pop up. It displays the name of the file being moved, the current transferring speed, and the remaining time for this file. It also displays an quantitative moving progress for the current file in a progress bar. You can also choose to first copy the samples to the destination directory using the ‘Copy’ button, and then delete the original files using the right-click pop-up menu. | + | |
- | </ | + | |
- | <WRAP half column> | + | |
- | {{ file: | + | |
- | </ | + | |
- | </ | + | |
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- | When all samples are within one directory, you can create a sample set with the top area of the right panel. Click the ‘Select’ button, then select this directory in the dialog that pops up. Then the path of the directory will be displayed in the ‘Directory’ text field, and the other components provide the following information: | + | |
- | * ‘Name’ text field: It is prepopulated with the name of the directory. | + | |
- | * ‘Description’ text area: providing a number of description entries for the sample set. It is prepopulated with common entries (e.g. Source laboratory). | + | |
- | * ‘Samples included’ list: It is prepopulated with the names of the samples contained within the directory. | + | |
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- | After entering these information, | + | |
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- | ===== Remove a sample set ===== | + | |
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- | To remove an existing sample set, first select it in the scenario tree in the left panel, then click the ' | + |