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Both sides previous revision Previous revision Next revision | Previous revision | ||
main:sample [2018/01/26 16:09] bshirley |
main:sample [2018/02/09 16:41] (current) yli [View sample description and DC frequencies] |
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<WRAP round important> | <WRAP round important> | ||
* **Directory metaphase images**\\ Cannot be modified. Displays the directory selected in the directory selection step. | * **Directory metaphase images**\\ Cannot be modified. Displays the directory selected in the directory selection step. | ||
- | * **Description of the sample (Optional)**\\ Description is optional and is not required to be formatted in any specific way. The content within the description of a sample is simply displayed when the sample is highlighted in the [[main: | + | * **Description of the sample (Optional)**\\ Description is optional and is not required to be formatted in any specific way. The content within the description of a sample is simply displayed when the sample is highlighted in the [[main: |
* **Number of metaphases**\\ Cannot be modified. Reports the number of TIFF image files found in the new sample directory. | * **Number of metaphases**\\ Cannot be modified. Reports the number of TIFF image files found in the new sample directory. | ||
* **List of metaphases in the sample**\\ Cannot be modified. A list of TIFF image files found in the new sample directory. | * **List of metaphases in the sample**\\ Cannot be modified. A list of TIFF image files found in the new sample directory. | ||
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* **DC/Cell (All)**\\ Number of DCs in all metaphase images found in the " | * **DC/Cell (All)**\\ Number of DCs in all metaphase images found in the " | ||
* **DC/Cell (Range)**\\ Number of DCs in all metaphase images found in the " | * **DC/Cell (Range)**\\ Number of DCs in all metaphase images found in the " | ||
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+ | =====Export DC results and filtering stats to a comma-separated file===== | ||
+ | Results of a processed samples can exported to a comma-separated-values(.csv) file to be analyzed in other tools. Simply highlight the sample and click the {{file: | ||
+ | \\ Only selected images will be included in the .csv file. Each row in the file represents an image. The file have 19 columns, which are image path, DC counts for sigma 0.8 to sigma 1.8, total object count, segmented object count, length-width ratio value, centromere density value, finite difference value, classified object count and classified object ratio. | ||